heatmap_of_annotation: HeatMap of Annotation (VF and/or AbR)
In irycisBioinfo/PATO: Pangenome Analysis Toolkit
View source: R/heatmap_of_annotation.R
heatmap_of_annotation R Documentation
HeatMap of Annotation (VF and/or AbR)
Description
Creates a heatmap with the annotation results. User can
filter the results by identity and/or evalue. This function
uses pheatmap instead of heatmap funtion if
pheatmap is installed.
Usage
heatmap_of_annotation(data, min_identity = 0.95, max_evalue = 1e-25)
Arguments
data
Data frame result from annotate.
min_identity
Minimun identity to show in figure.
max_evalue
Maximun Evalue to show in figure.
irycisBioinfo/PATO documentation built on Oct. 19, 2023, 3:07 p.m.
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View source: R/heatmap_of_annotation.R
| heatmap_of_annotation | R Documentation |
HeatMap of Annotation (VF and/or AbR)
Description
Creates a heatmap with the annotation results. User can filter the results by identity and/or evalue. This function uses pheatmap instead of heatmap funtion if pheatmap is installed.
Usage
heatmap_of_annotation(data, min_identity = 0.95, max_evalue = 1e-25)
Arguments
data |
Data frame result from annotate. |
min_identity |
Minimun identity to show in figure. |
max_evalue |
Maximun Evalue to show in figure. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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