outliers: Find outliers in the dataset.
In irycisBioinfo/PATO: Pangenome Analysis Toolkit
outliers R Documentation
Find outliers in the dataset.
Description
Find outliers in the dataset using a threshold distance (mash o jaccard distance) or by
standard deviation times. This function also plot a manhattan plot to visualize the
structure of the distance distribution of the input object.
Usage
outliers(data, threshold, n_sd, plot = TRUE)
Arguments
data
An accnet or mash object
threshold
threshold for outliers (outliers >= threshold)
n_sd
Number of standard deviation as threshold.
plot
Boolean plot manhattan?
Value
a data.frame with the set of outliers.
See Also
remove_outliers
irycisBioinfo/PATO documentation built on Oct. 19, 2023, 3:07 p.m.
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| outliers | R Documentation |
Find outliers in the dataset.
Description
Find outliers in the dataset using a threshold distance (mash o jaccard distance) or by standard deviation times. This function also plot a manhattan plot to visualize the structure of the distance distribution of the input object.
Usage
outliers(data, threshold, n_sd, plot = TRUE)
Arguments
data |
An accnet or mash object |
threshold |
threshold for outliers (outliers >= threshold) |
n_sd |
Number of standard deviation as threshold. |
plot |
Boolean plot manhattan? |
Value
a data.frame with the set of outliers.
See Also
remove_outliers
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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