singles: Find singles (genes/proteins) in a AccNET object
In irycisBioinfo/PATO: Pangenome Analysis Toolkit
singles R Documentation
Find singles (genes/proteins) in a AccNET object
Description
singles() return the genes/proteins that are only present in each
genome or cluster of genomes.
Usage
singles(data, cluster)
Arguments
data
An accnet object.
cluster
A data.frame with two columns. The first one must match with
Source column of Accnet object (usually the genomes/samples). Second one
must contain a categorical variable (cluster, group, ST, origin, source ...)
Value
A data.frame with Genome/cluster, the genes/proteins belong to
Genome/Cluster and its annotation.
irycisBioinfo/PATO documentation built on Oct. 19, 2023, 3:07 p.m.
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| singles | R Documentation |
Find singles (genes/proteins) in a AccNET object
Description
singles() return the genes/proteins that are only present in each genome or cluster of genomes.
Usage
singles(data, cluster)
Arguments
data |
An accnet object. |
cluster |
A data.frame with two columns. The first one must match with Source column of Accnet object (usually the genomes/samples). Second one must contain a categorical variable (cluster, group, ST, origin, source ...) |
Value
A data.frame with Genome/cluster, the genes/proteins belong to Genome/Cluster and its annotation.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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