add_se_cols: Add column to toptab with standard errors

In jdreyf/ezlimma: Streamlines and extends limma package

Add column to toptab with standard errors

Description

Add column to toptab with standard errors.

Usage

add_se_cols(toptab, lfc.suffix = "logFC", t.suffix = "t")

Arguments

toptab	Table with genes as rows and statistics as columns. Must include a column with t-statistics e.g. named "t" or ends with ".t" & a column of log fold changes e.g. named "logFC" or ends with ".logFC". Columns with t-statistics and those with logFC's must have same prefixes.
lfc.suffix	Suffix of logFC column(s).
t.suffix	Suffix of t-statistic column(s).

jdreyf/ezlimma documentation built on Sept. 16, 2024, 2:08 a.m.