prop_changed: Calculate proportion of changed features per pathway
In jdreyf/ezlimma: Streamlines and extends limma package
prop_changed R Documentation
Calculate proportion of changed features per pathway
Description
Calculate proportion of features up & down at p=0.05 per pathway.
Usage
prop_changed(feat.tab, feat.lst, stat.col = 1, p.col = 2)
Arguments
feat.tab
Table of feature (e.g. gene) statistics.
feat.lst
Named list, with each element containing names or indices of rows of feat.tab.
stat.col
Column name or column index with signed statistics.
p.col
Column name or column index with p-values.
jdreyf/ezlimma documentation built on June 11, 2025, 3:53 p.m.
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| prop_changed | R Documentation |
Calculate proportion of changed features per pathway
Description
Calculate proportion of features up & down at p=0.05 per pathway.
Usage
prop_changed(feat.tab, feat.lst, stat.col = 1, p.col = 2)
Arguments
feat.tab |
Table of feature (e.g. gene) statistics. |
feat.lst |
Named list, with each element containing names or indices of rows of |
stat.col |
Column name or column index with signed statistics. |
p.col |
Column name or column index with p-values. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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