gmat2gmt: Transform analyte-by-pathway matrix into list compatible with...
In jdreyf/ezlimma: Streamlines and extends limma package
gmat2gmt R Documentation
Transform analyte-by-pathway matrix into list compatible with Gene Matrix Transposed (GMT) file format
Description
Transform analyte-by-pathway matrix into list compatible with Gene Matrix Transposed (GMT) file format, described at the Broad Institute.
Usage
gmat2gmt(gmat)
Arguments
gmat
A numeric Matrix of features (proteins and/or metabolites) as rows and pathways as columns, indicating
pathway membership with positive elements.
Value
A list of analyte sets. Each element has a set name, description, and genes.
jdreyf/ezlimma documentation built on April 28, 2024, 1:10 p.m.
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| gmat2gmt | R Documentation |
Transform analyte-by-pathway matrix into list compatible with Gene Matrix Transposed (GMT) file format
Description
Transform analyte-by-pathway matrix into list compatible with Gene Matrix Transposed (GMT) file format, described at the Broad Institute.
Usage
gmat2gmt(gmat)
Arguments
gmat |
A numeric Matrix of features (proteins and/or metabolites) as rows and pathways as columns, indicating pathway membership with positive elements. |
Value
A list of analyte sets. Each element has a set name, description, and genes.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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