roast_two2one_tailed: Convert roast two-tailed results to one-tailed

In jdreyf/ezlimma: Streamlines and extends limma package

Convert roast two-tailed results to one-tailed

Description

Convert mroast or fry two-tailed results to one-tailed and remove non-directional, termed "Mixed", statistics.

Usage

roast_two2one_tailed(roast.res, fun, alternative, nrot, adjust.method)

Arguments

roast.res	Result from mroast or fry.
fun	Function to use, either fry or mroast.
alternative	Alternative hypothesis; must be one of "two.sided", "greater" or "less". "greater" corresponds to positive association, "less" to negative association.
nrot	Number of rotations used to estimate the p-values for mroast.
adjust.method	Method used to adjust the p-values for multiple testing. Options, in increasing conservatism, include "none", "BH", "BY", and "holm". See p.adjust for the complete list of options. A NULL value will result in the default adjustment method, which is "BH".

Value

Modified result from mroast or fry.

jdreyf/ezlimma documentation built on April 28, 2024, 1:10 p.m.