percentInTarget: percent in target range read depth For 15 to 60 for 30x (50...
In jentom/genotypeeval: QA/QC of a gVCF or VCF file
Description
Usage
Arguments
Value
Description
percent in target range read depth
For 15 to 60 for 30x (50 percent to 200 percent)
Usage
1
percentInTarget(x, target, percent.target)
Arguments
x
myvcf of interest
target
Coverage target
percent.target
From params, the percent required to be in target
Value
list with name, logical (passed or not), numeric percent in target range
jentom/genotypeeval documentation built on May 13, 2019, 12:54 p.m.
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Description Usage Arguments Value
Description
percent in target range read depth For 15 to 60 for 30x (50 percent to 200 percent)
Usage
1 | percentInTarget(x, target, percent.target)
|
Arguments
x |
myvcf of interest |
target |
Coverage target |
percent.target |
From params, the percent required to be in target |
Value
list with name, logical (passed or not), numeric percent in target range
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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