Files in jesse-smith/covidReport
SCHD Package for Reporting COVID-19 Data

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.github/CODE_OF_CONDUCT.md .github/CONTRIBUTING.md .github/ISSUE_TEMPLATE/issue_template.md .github/SUPPORT.md

.github/workflows/R-CMD-check.yaml

.github/workflows/pkgdown.yaml

.github/workflows/pr-commands.yaml

.github/workflows/test-coverage.yaml

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DESCRIPTION

LICENSE.md

NAMESPACE

R/active_age.R R/active_ethnicity.R R/active_map_peds.R R/active_map_rate.R R/active_race.R R/active_sex.R R/add_testing_sites.R R/age_10day.R R/as_tbl.R R/case_plot_10day.R R/case_plot_30day.R R/case_plot_30day_weekly_label.R R/case_plot_cumulative.R R/case_plot_cumulative_weekly_label.R R/case_plot_daily.R R/case_plot_daily_weekly_label.R R/case_plot_report_date.R R/case_table_active.R R/case_table_confirmed_probable.R R/count_pop.R R/death_age.R R/death_curve_14_day_avg_percent.R R/death_curve_30_day_avg_percent.R R/death_curve_dod.R R/death_ethnicity.R R/death_race.R R/death_sex.R R/death_table_age_summary.R R/death_table_total.R R/demog_calc_.R R/demog_plot_.R R/demog_table_.R R/deprecated.R R/filter_active.R R/filter_deaths.R R/filter_peds.R R/flextable.R R/fmt_covid_table.R R/grant_zip_active_map_rate.R R/grant_zip_quarterly_case_rate_map.R R/grant_zip_quarterly_death_rate_map.R R/grant_zip_quarterly_test_rate_map.R R/grant_zip_quarterly_vac_rate_map.R R/grant_zip_test_map_rate.R R/grant_zip_vac_bivalent_map_pct.R R/grant_zip_vac_fully_map_pct.R R/grant_zip_vac_map_pct.R R/gs_timeseries.R R/inspections_table.R R/inv_table_total.R R/ped_all_epi_curve.R R/ped_epi_curve.R R/peds_ethnicity.R R/peds_race.R R/peds_sex.R R/pop_2019.R R/prod_table.R

R/read_prod.R

R/rpt_daily.R R/rpt_demog.R R/rpt_weekly.R R/rpt_weekly_New_report.R R/save_plot.R R/scale_breaks.R R/shelby_poly.R R/skip_reports.R R/test_map_rate.R R/test_plot_positivity.R R/test_plot_total.R R/test_table_total.R R/utils-coviData.R R/utils-magrittr.R R/utils-tidyeval-symbols.R R/utils-tidyeval-where.R R/utils-vctrs.R R/vac_back_generate_data.R R/vac_count.R R/vac_fully_map_pct.R R/vac_map_pct.R R/vac_map_pct_bivalent.R R/vac_plot_30_day.R R/vac_plot_age.R R/vac_plot_age_up_to_date.R R/vac_plot_daily.R R/vac_plot_goal.R R/vac_table_recent.R R/vac_table_totals.R R/vaccine_report.R R/vaccine_tables_email.R R/zip_shape.R README.md

_pkgdown.yml

codecov.yml

covidReport.Rproj

data-raw/data-tests.R data-raw/pop_2019.R data-raw/shelby_poly.R data-raw/zip_shape.R

data/pop_2019.rda

data/shelby_poly.rda

data/zip_shape.rda

inst/extdata/covid_report_template.pptx

man/active_calc_age.Rd man/active_calc_ethnicity.Rd man/active_calc_race.Rd man/active_calc_sex.Rd man/active_map_rate.Rd man/active_plot_age.Rd man/active_plot_ethnicity.Rd man/active_plot_race.Rd man/active_plot_sex.Rd man/active_table_age.Rd man/active_table_ethnicity.Rd man/active_table_race.Rd man/active_table_sex.Rd man/as_tbl.Rd man/case_calc_active.Rd man/case_calc_confirmed_probable.Rd man/case_plot_cumulative.Rd man/case_plot_daily.Rd man/case_table_active.Rd man/case_table_confirmed_probable.Rd man/count_pop.Rd man/coviData-helpers.Rd man/death_calc_age.Rd man/death_calc_age_summary.Rd man/death_calc_ethnicity.Rd man/death_calc_race.Rd man/death_calc_sex.Rd man/death_calc_total.Rd man/death_plot_age.Rd man/death_plot_ethnicity.Rd man/death_plot_race.Rd man/death_plot_sex.Rd man/death_table_age.Rd man/death_table_age_summary.Rd man/death_table_ethnicity.Rd man/death_table_race.Rd man/death_table_sex.Rd man/death_table_total.Rd man/demog_age_grp_.Rd man/demog_calc_.Rd man/demog_collapse_age_.Rd man/demog_collapse_race_.Rd man/demog_join_.Rd man/demog_plot_.Rd man/demog_race_grp_.Rd man/demog_relevel_race.Rd man/demog_table_.Rd

man/figures/lifecycle-archived.svg

man/figures/lifecycle-defunct.svg

man/figures/lifecycle-deprecated.svg

man/figures/lifecycle-experimental.svg

man/figures/lifecycle-maturing.svg

man/figures/lifecycle-questioning.svg

man/figures/lifecycle-stable.svg

man/figures/lifecycle-superseded.svg

man/filter_active.Rd man/filter_deaths.Rd man/filter_peds.Rd man/fmt_covid_table.Rd man/gs_timeseries.Rd man/insp_archive_table.Rd man/insp_cast_chr_date.Rd man/insp_cols_exist.Rd man/insp_create_table.Rd man/insp_load_data.Rd man/insp_prep_data.Rd man/insp_replace_year_long.Rd man/insp_save_table.Rd man/insp_table_pipeline.Rd man/insp_trim_archive.Rd man/insp_trim_tables.Rd man/inv_calc_total.Rd man/inv_table_total.Rd man/magrittr-helpers.Rd man/peds_calc_ethnicity.Rd man/peds_calc_race.Rd man/peds_calc_sex.Rd man/peds_plot_ethnicity.Rd man/peds_plot_race.Rd man/peds_plot_sex.Rd man/peds_table_ethnicity.Rd man/peds_table_race.Rd man/peds_table_sex.Rd man/ph_location_table.Rd man/plot_vac_age.Rd man/plot_vaccinations.Rd man/pop_2019.Rd man/prod_calc.Rd man/prod_table.Rd man/read_prod.Rd man/reexports.Rd man/rpt_daily_mail.Rd man/rpt_daily_pptx.Rd man/rpt_demog_pptx.Rd man/save_plot.Rd man/scale_breaks.Rd man/scale_by.Rd man/shelby_poly.Rd man/skip_reports.Rd man/test_calc_total.Rd man/test_map_rate.Rd man/test_plot_positivity.Rd man/test_plot_total.Rd man/test_table_total.Rd man/utils-tidyeval-symbols.Rd man/vac_count.Rd man/vac_date.Rd man/vac_map_pct.Rd man/vac_plot_age.Rd man/vac_plot_goal.Rd man/vac_residents.Rd man/vac_table_recent.Rd man/vac_table_totals.Rd man/vctr-helpers.Rd man/violation_style.Rd man/zip_shape.Rd scripts/script - inspections_table_pipeline.R scripts/script - plot_vaccinations.R scripts/vaccine_effectiveness.R

tests/data/test_cumulative_data.rds

tests/data/test_positivity_data.rds

tests/data/test_report_data.rds

tests/figs/active-plot-age/active-case-rate-by-age.svg

tests/figs/active-plot-ethnicity/active-case-rate-by-ethnicity.svg

tests/figs/active-plot-race/active-case-rate-by-race.svg

tests/figs/active-plot-sex/active-case-rate-by-sex.svg

tests/figs/case-plot-cumulative/cumulative-cases.svg

tests/figs/case-plot-daily/daily-cases.svg

tests/figs/death-plot-age/death-rate-by-age.svg

tests/figs/death-plot-ethnicity/death-case-rate-by-ethnicity.svg

tests/figs/death-plot-race/death-case-rate-by-race.svg

tests/figs/death-plot-sex/death-case-rate-by-sex.svg

tests/figs/deps.txt

tests/figs/peds-plot-ethnicity/peds-case-rate-by-ethnicity.svg

tests/figs/peds-plot-race/peds-case-rate-by-race.svg

tests/figs/peds-plot-sex/peds-case-rate-by-sex.svg

tests/figs/test-plot-positivity/test-positivity.svg

tests/figs/vac-age-distr-12plus/vaccination-distribution-by-age-no-under-12.svg

tests/figs/vac-age-distr-under12/vaccination-distribution-by-age-w-under-12.svg

tests/figs/vac-age-pop-12plus/vaccination-rate-by-age-no-under-12.svg

tests/figs/vac-age-rate-under12/vaccination-rate-by-age-w-under-12.svg

tests/testthat.R tests/testthat/_snaps/active_age.md

tests/testthat/_snaps/active_age/active-case-rate-by-age.svg

tests/testthat/_snaps/active_ethnicity.md

tests/testthat/_snaps/active_ethnicity/active-case-rate-by-ethnicity.svg

tests/testthat/_snaps/active_map_rate.md tests/testthat/_snaps/active_race.md

tests/testthat/_snaps/active_race/active-case-rate-by-race.svg

tests/testthat/_snaps/active_sex.md

tests/testthat/_snaps/active_sex/active-case-rate-by-sex.svg

tests/testthat/_snaps/case_plot_cumulative/cumulative-cases.svg

tests/testthat/_snaps/case_plot_daily/daily-cases.svg

tests/testthat/_snaps/case_table_active.md tests/testthat/_snaps/case_table_confirmed_probable.md tests/testthat/_snaps/death_age.md

tests/testthat/_snaps/death_age/death-rate-by-age.svg

tests/testthat/_snaps/death_ethnicity.md

tests/testthat/_snaps/death_ethnicity/death-case-rate-by-ethnicity.svg

tests/testthat/_snaps/death_race.md

tests/testthat/_snaps/death_race/death-case-rate-by-race.svg

tests/testthat/_snaps/death_sex.md

tests/testthat/_snaps/death_sex/death-case-rate-by-sex.svg

tests/testthat/_snaps/death_table_age_summary.md tests/testthat/_snaps/death_table_total.md tests/testthat/_snaps/filter_active.md tests/testthat/_snaps/filter_deaths.md tests/testthat/_snaps/filter_peds.md tests/testthat/_snaps/inv_table_total.md tests/testthat/_snaps/peds_ethnicity.md

tests/testthat/_snaps/peds_ethnicity/peds-case-rate-by-ethnicity.svg

tests/testthat/_snaps/peds_race.md

tests/testthat/_snaps/peds_race/peds-case-rate-by-race.svg

tests/testthat/_snaps/peds_sex.md

tests/testthat/_snaps/peds_sex/peds-case-rate-by-sex.svg

tests/testthat/_snaps/scale_breaks.md tests/testthat/_snaps/test_map_rate.md

tests/testthat/_snaps/test_plot_positivity/test-positivity.svg

tests/testthat/_snaps/test_plot_total/test-total.svg

tests/testthat/_snaps/test_table_total.md tests/testthat/_snaps/vac_map_pct.md

tests/testthat/_snaps/vac_plot_age/vaccination-distribution-by-age-no-under-12.svg

tests/testthat/_snaps/vac_plot_age/vaccination-distribution-by-age-w-under-12.svg

tests/testthat/_snaps/vac_plot_age/vaccination-rate-by-age-no-under-12.svg

tests/testthat/_snaps/vac_plot_age/vaccination-rate-by-age-w-under-12.svg

tests/testthat/_snaps/vac_plot_goal/vaccination-goal.svg

jesse-smith/covidReport documentation built on Aug. 3, 2024, 4:52 p.m.

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jesse-smith/covidReport
SCHD Package for Reporting COVID-19 Data

Files in jesse-smith/covidReport
SCHD Package for Reporting COVID-19 Data

R Package Documentation

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jesse-smith/covidReport SCHD Package for Reporting COVID-19 Data

Files in jesse-smith/covidReport SCHD Package for Reporting COVID-19 Data

R Package Documentation

Browse R Packages

We want your feedback!

jesse-smith/covidReport
SCHD Package for Reporting COVID-19 Data

Files in jesse-smith/covidReport
SCHD Package for Reporting COVID-19 Data