Description Usage Format Source
A example output of map_pep_ref
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1 |
A list with two data.frame: $count_df
Genbank reference ID
Number of translated reads mapped to the genebank ID reference
$alignment_df
Read name i.e. query name
Protein reference ID
Poistion start on the reference DNA sequence
Poistion end on the reference DNA sequence
Mapping quality
e-value of Blast
How equal is the reference to the read?
Genebank ID of the reference sequence
ftp://ftp.ncbi.nlm.nih.gov/genbank
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