generate_read: Generates a _single_ read from a sequence
In jkruppa/virDisco: Modules for a viral detection pipeline
Description
Usage
Arguments
Details
Author(s)
View source: R/generate_decoy_reads.R
Description
A internal function of generate_decoy_reads. Linux only.
Usage
1
generate_read(decoy_seq, files, paired = TRUE, read_length, read_gap = 50)
Arguments
decoy_seq
Sequence as DNAStringSet
files
File path to the output file(s)
paired
Logical, should the reads be paired? [default =
TRUE]
read_length
Numeric, read length
read_gap
If paired, how large should be the gap?
Details
This function call generates a set or one sequence read of a given
length from a inital sequence.
Author(s)
Jochen Kruppa
jkruppa/virDisco documentation built on May 3, 2019, 7:05 p.m.
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Description Usage Arguments Details Author(s)
View source: R/generate_decoy_reads.R
Description
A internal function of generate_decoy_reads. Linux only.
Usage
1 | generate_read(decoy_seq, files, paired = TRUE, read_length, read_gap = 50)
|
Arguments
decoy_seq |
Sequence as DNAStringSet |
files |
File path to the output file(s) |
paired |
Logical, should the reads be paired? [default = TRUE] |
read_length |
Numeric, read length |
read_gap |
If paired, how large should be the gap? |
Details
This function call generates a set or one sequence read of a given length from a inital sequence.
Author(s)
Jochen Kruppa
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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