Description Usage Arguments Details Value Author(s)
The function divides a DNAStringSet into a list of smaller objects given a threshold.
1 | get_seq_chunks_by_threshold(seqs, threshold)
|
seqs |
DNAStringSet object with sequences |
threshold |
maximal summed width of sequences in a chunk |
Sometimes programs can not handle to long sequences. The functions allows to build up chunks without cutting sequences. If the threshold is exceeded by adding a sequence, the exceeding sequence will be put in the next chunk.
list() of chunks with the width less the threshold
Jochen Kruppa
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