z.thres.cons.bins: Z-score thresholding using bin consecutiveness.

Description Usage Arguments Value Author(s)

View source: R/z.thres.cons.bins.R

Description

Find a threshold on the Z-scores associated with how many consecutive bins are found.

Usage

1

Arguments

z.df

a data.frame with at least 'chr', 'start', 'end' and 'z' columns.

Value

a list with:

dup.th

the threshold for positive Z-scores (duplication signal)

del.th

the threshold for negative Z-scores (deletion signal)

sigma.est.dup

the estimated null distribution variance for positive Z-scores

sigma.est.del

the estimated null distribution variance for negative Z-scores

Author(s)

Jean Monlong


jmonlong/PopSV documentation built on Sept. 1, 2018, 12:04 p.m.