Files in jmzeng1314/IRseq

statistics and visualization for immune repertoire sequencing data

.Rbuildignore

.gitignore

DESCRIPTION

IRseq.Rproj

NAMESPACE

R/QC_IR.R R/compare_usage.R R/hello.R R/pkgs_install.R R/plot_IR_basic.R R/plot_cdr3_paired_comparison.R R/plot_cdr3_stat.R R/plot_cdr3aa_bar.R R/plot_matrix_t_test.R R/plot_t_test.R R/plot_v_j_combination.R R/plot_vdj_usage_ht.R R/stat_IR_basic.R R/stat_cdr3_diversity.R R/stat_cdr3aa_saturation.R

data/keeP_IRdata.rda

docs/IRseq_example.Rmd

docs/IRseq_example.html

docs/IRseq_example.utf8.md

docs/d50.t.test.png

docs/gini.t.test.png

docs/shannon.t.test.png

docs/simpson.t.test.png

docs/test.v-j.circle.pdf man/QC_IR.Rd man/compare_usage.Rd man/hello.Rd man/pkgs_install.Rd man/plot_IR_basic.Rd man/plot_cdr3_paired_comparison.Rd man/plot_cdr3_stat.Rd man/plot_cdr3aa_bar.Rd man/plot_matrix_t_test.Rd man/plot_t_test.Rd man/plot_v_j_combination.Rd man/plot_vdj_usage_ht.Rd man/stat_IR_basic.Rd man/stat_cdr3_diversity.Rd man/stat_cdr3aa_saturation.Rd readme.md

test/.DS_Store

test/run.R

jmzeng1314/IRseq documentation built on May 8, 2019, 7:48 p.m.