plot_vdj_usage_ht: Heatmap for V/D/J usage among samples
In jmzeng1314/IRseq: statistics and visualization for immune repertoire sequencing data
Description
Usage
Arguments
Examples
Description
It will generate a published quality figure according to the V/D/J usage matrix
Usage
1
plot_vdj_usage_ht(usage_matrix, file_out)
Arguments
usage_matrix
cols are V/D/J, rows are samples
file_out
the filename of output figue,should end up with pdf or png
Examples
1
#' plot_vdj_usage_ht(v_usage_matrix,'v-usage-heatmap.pdf')
jmzeng1314/IRseq documentation built on May 8, 2019, 7:48 p.m.
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Description Usage Arguments Examples
Description
It will generate a published quality figure according to the V/D/J usage matrix
Usage
1 | plot_vdj_usage_ht(usage_matrix, file_out)
|
Arguments
usage_matrix |
cols are V/D/J, rows are samples |
file_out |
the filename of output figue,should end up with pdf or png |
Examples
1 | #' plot_vdj_usage_ht(v_usage_matrix,'v-usage-heatmap.pdf')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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