plot_v_j_combination: visualization for V-J combination

In jmzeng1314/IRseq: statistics and visualization for immune repertoire sequencing data

Description

It will generate a published quality figure according to the V and J usage marix.

Usage

plot_v_j_combination(vj_usage_matrix, image_type, file_out)

Arguments

vj_usage_matrix	columns and rows correspond to V and J segments respectively
image_type	cirle/bubble/3D_barplot
file_out	the filename of output figue,should end up with pdf or png

Examples

#' plot_v_j_combination(vj_usage_matrix,'circle','v-j-circle.pdf')

jmzeng1314/IRseq documentation built on May 8, 2019, 7:48 p.m.