Description Usage Arguments Value Examples
By 1 2 3 4 5 6 7 8 9 10 20 30 40 50 60 70 80 90 percent Or user defined the percent and times, eg: 10 To counts the reads/distinct cdr3aa number/QC/diversity
1 | stat_cdr3aa_saturation(IRsample, by, times)
|
IRsample |
cdr3aa column is needed, other(V,D,J,cdr3nt,type) are optional. |
times |
how many times should be sampled. |
number |
range from 1~99 |
saturation_matrix 18 rows and 8 columns
1 | #' plot_cdr3_stat(stat_matrix,'cdr3aa-distribution-stat.pdf')
|
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