jrthompson54/DGE.Tools2
A function library to facilitate Differential Gene Expression Analysis

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Functions
121
Source code
65
Man pages
59
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jrthompson54/DGE.Tools2: A function library to facilitate Differential Gene Expression Analysis
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API

API for jrthompson54/DGE.Tools2
A function library to facilitate Differential Gene Expression Analysis

Global functions
.extractCol1 Man page Source code
.extractCol2 Man page Source code
.getChrDat Source code
MDS_var_explained Man page Source code
NoLegend Man page Source code
NoXGrid Man page Source code
NoXlab Man page Source code
NoYGrid Man page Source code
NoYlab Man page Source code
OmicsoftToDgeObj Man page
QCplots Man page Source code
Txt2DF Source code
addFootnote Man page
add_numbered_colnames Man page Source code
baseFont Man page Source code
baseTheme Man page Source code
calcCPM Source code
calcFPK Source code
calcFPKM Source code
calcTPM Source code
cdfPlot Man page Source code
checkSex Man page Source code
comparePlot Man page Source code
comparePrep Man page Source code
convertCounts Man page Source code
df_to_excel Man page Source code
dflist_to_excel Man page Source code
eBayes_autoprop Man page Source code Source code
extractCol Man page Source code
facetTheme Man page Source code
fpkmToTpm Source code
getXrange Man page Source code
getYrange Man page Source code
get_mds Man page Source code
ggplotMDS Man page Source code
isoformFrac Man page Source code
logRatioPlot Man page Source code
lowIntFilter Man page Source code
mapDGEobj Man page Source code
obsPlot Man page Source code
obsPlot2 Man page Source code
plotDisp Man page
plotNorm Man page Source code
plotPvalHist Man page
printAndSave Man page
printWithFootnote Man page Source code
profilePlot Man page Source code
rsq_calc Man page Source code
runContrasts Man page Source code
runEdgeRNorm Man page Source code
runIHW Man page Source code
runPower Man page Source code
runQvalue Man page Source code
runSVA Man page Source code
runVoom Man page Source code
setLegendPosition Man page Source code
summarizeSigCounts Man page Source code
tidyContrasts Man page Source code
tidyIntensity Man page Source code
topTable.merge Man page Source code
tpm.direct Man page
tpm.on.subset Man page Source code
tsmsg Source code
volcanoPlot Man page Source code
voomWorkflow Man page Source code
xrange Man page Source code
yrange Man page Source code
jrthompson54/DGE.Tools2 documentation built on May 12, 2021, 8:47 p.m.

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