Files in jtlovell/qtlTools

Data Processing and Plotting in Association with R/qtl

R/calcCis.R R/covScanQTL.R R/dropByDropone.R R/dropSimilarMarkers.R R/findGenecM.R R/findGenesInterval.R R/geno2cross.R R/inferMarkerPos.R R/matchMarkerOrder.R R/meanScan.R R/newLG.R R/pal_jtl.R R/plotGeneModel.R R/polygenicQTL.R R/pullMap.R R/pullSigQTL.R R/qtlSignTest.R R/qtlStats.R R/quantnorm.R R/reDoCross.R R/repPickMarkerSubset.R R/repRipple.R R/rqtl.utils.R R/scanone.GWERk.R R/scanone.lmer.R R/scantwo.GWERk.R R/segmentsOnMap.R R/segmentsOnPeaks.R R/splitText.R R/stepwiseqtl.int.R R/swGenotype.R R/theme_jtl.R R/theme_jtlbar.R R/tspOrder.R README.md inst/doc/compareGWERkPermutation.R inst/doc/compareGWERkPermutation.Rmd inst/doc/findCandidateGenes.R inst/doc/findCandidateGenes.Rmd inst/doc/fixGeneticMaps.R inst/doc/fixGeneticMaps.Rmd inst/doc/introQTL.R inst/doc/introQTL.Rmd inst/doc/multiQTL.R inst/doc/multiQTL.Rmd man/calcCis.Rd man/covScanQTL.Rd man/dropByDropone.Rd man/dropSimilarMarkers.Rd man/findGenecM.Rd man/findGenesInterval.Rd man/geno2cross.Rd man/inferMarkerPos.Rd man/matchMarkerOrder.Rd man/meanScan.Rd man/newLG.Rd man/plotGeneModel.Rd man/polygenicQTL.Rd man/pullMap.Rd man/pullSigQTL.Rd man/qtlSignTest.Rd man/qtlStats.Rd man/quantnorm.Rd man/reDoCross.Rd man/repPickMarkerSubset.Rd man/repRipple.Rd man/scanone.GWERk.Rd man/scanone.lmer.Rd man/scantwo.GWERk.Rd man/segmentsOnMap.Rd man/segmentsOnPeaks.Rd man/splitText.Rd man/stepwiseqtl.int.Rd man/swGenotype.Rd man/theme_jtl.Rd man/theme_jtlbar.Rd man/tspOrder.Rd