fromLimma: Convert outputs from tools other than DESeq2 for...
In kevincjnixon/BinfTools: Useful functions for standard analyses
fromLimma R Documentation
Convert outputs from tools other than DESeq2 for compatibility with BinfTools
Description
These functions convert results from Limma or EdgeR for compaitibility with BinfTools
Usage
fromLimma(topTable, geneNames = rownames(topTable))
Arguments
topTable
A data frame originating from the output of limma::topTable()
geneNames
Acharacter vector specifying the names of the genes. Defaults to rownames(topTable) or rownames(topTags$table).
Value
A data frame of results compatible with BinfTools commands
kevincjnixon/BinfTools documentation built on July 10, 2024, 11:46 a.m.
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| fromLimma | R Documentation |
Convert outputs from tools other than DESeq2 for compatibility with BinfTools
Description
These functions convert results from Limma or EdgeR for compaitibility with BinfTools
Usage
fromLimma(topTable, geneNames = rownames(topTable))
Arguments
topTable |
A data frame originating from the output of limma::topTable() |
geneNames |
Acharacter vector specifying the names of the genes. Defaults to rownames(topTable) or rownames(topTags$table). |
Value
A data frame of results compatible with BinfTools commands
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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