normToGene: Normalize gene expression to specific genes

In kevincjnixon/BinfTools: Useful functions for standard analyses

Normalize gene expression to specific genes

Description

This function will normalize gene expression in a count matrix relative to a given gene or vector of genes.

Usage

normToGene(counts, norm)

Arguments

counts	count matrix (normalized or raw) with genes as rows and samples as columns
norm	character vector of length >=1 of gene names (matching rownames(counts)) to use as reference genes for normalization. If length > 1, geometric mean of genes' expressions will be used.

Value

data frame of dim(counts) of gene expression normalized relative to 'norm'

kevincjnixon/BinfTools documentation built on July 10, 2024, 11:46 a.m.