filterOntologyDf: Filter ontology dataframe
In kharchenkolab/cacoa: Case-Control Analysis Tools for Single-Cell RNA-Seq
filterOntologyDf R Documentation
Filter ontology dataframe
Description
Filter ontology dataframe
Usage
filterOntologyDf(
ont.df,
p.adj = 0.05,
q.value = 0.2,
min.genes = 1,
subtype = NULL,
cell.subgroups = NULL
)
Arguments
ont.df
Ontology dataframe
p.adj
Adj. P cut-off (default=0.05)
q.value
(default=0.2)
min.genes
Min. number of significant terms per term (default=1)
subtype
(default=NULL)
cell.subgroups
(default=NULL)
kharchenkolab/cacoa documentation built on Nov. 8, 2024, 6:06 a.m.
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| filterOntologyDf | R Documentation |
Filter ontology dataframe
Description
Filter ontology dataframe
Usage
filterOntologyDf(
ont.df,
p.adj = 0.05,
q.value = 0.2,
min.genes = 1,
subtype = NULL,
cell.subgroups = NULL
)
Arguments
ont.df |
Ontology dataframe |
p.adj |
Adj. P cut-off (default=0.05) |
q.value |
(default=0.2) |
min.genes |
Min. number of significant terms per term (default=1) |
subtype |
(default=NULL) |
cell.subgroups |
(default=NULL) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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