validateDEPerCellTypeParams: Validate parameters per cell type

In kharchenkolab/cacoa: Case-Control Analysis Tools for Single-Cell RNA-Seq

Validate parameters per cell type

Description

Validate parameters per cell type

Usage

validateDEPerCellTypeParams(raw.mats, cell.groups, sample.groups, ref.level)

Arguments

raw.mats	List of raw count matrices
cell.groups	Named clustering/annotation factor with cell names
sample.groups	Named factor with cell names indicating condition/sample, e.g., ctrl/disease
ref.level	Reference cluster level in 'sample.groups', e.g., ctrl, healthy, wt

kharchenkolab/cacoa documentation built on Nov. 8, 2024, 6:06 a.m.