DA_by_scran: Wrapper for call_DA_scran generating reference and target...

View source: R/evaluate_DA.R

DA_by_scranR Documentation

Wrapper for call_DA_scran generating reference and target calls

Description

Wrapper for call_DA_scran generating reference and target calls

Usage

DA_by_scran(ref_data, data, groups, oracle_calls = NULL)

Arguments

ref_data

absolute abundance data set (samples x features)

data

relative abundance data set (samples x features)

groups

group (cohort) labels

oracle_calls

optional baseline (true) differential abundance calls

Value

baseline (true) differential abundance calls and calls made on relative abundances


kimberlyroche/codaDE documentation built on May 11, 2022, 12:40 a.m.