scaled_counts_scran: Scale counts using scran-like size factors
In kimberlyroche/codaDE: What the Package Does in One 'Title Case' Line
View source: R/fit_pred_models.R
scaled_counts_scran R Documentation
Scale counts using scran-like size factors
Description
Scale counts using scran-like size factors
Usage
scaled_counts_scran(counts, groups, pseudocount = 0.5)
Arguments
counts
count table oriented as samples (rows) x features (columns)
groups
group or treatment labels for columns
pseudocount
small count to augment whole matrix by in order to
eliminate zero counts
Value
scaled count table oriented as samples (rows) x features (columns)
kimberlyroche/codaDE documentation built on May 11, 2022, 12:40 a.m.
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View source: R/fit_pred_models.R
| scaled_counts_scran | R Documentation |
Scale counts using scran-like size factors
Description
Scale counts using scran-like size factors
Usage
scaled_counts_scran(counts, groups, pseudocount = 0.5)
Arguments
counts |
count table oriented as samples (rows) x features (columns) |
groups |
group or treatment labels for columns |
pseudocount |
small count to augment whole matrix by in order to eliminate zero counts |
Value
scaled count table oriented as samples (rows) x features (columns)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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