normalize_Athanasiadou: Utility function that applies the ERCC normalization code...
In kimberlyroche/codaDE: What the Package Does in One 'Title Case' Line
View source: R/parse_datasets.R
normalize_Athanasiadou R Documentation
Utility function that applies the ERCC normalization code from Athanasiadou
et al. (2021)
Description
Utility function that applies the ERCC normalization code from Athanasiadou
et al. (2021)
Usage
normalize_Athanasiadou(file_dir, SI_file, RNA_file, ERCC_annot, groups)
Arguments
file_dir
base file directory
SI_file
experiment SI file
RNA_file
experiment RNA file
ERCC_annot
experiment ERCC file
groups
per-sample group labels
Value
matrix of rescaled count data
kimberlyroche/codaDE documentation built on May 11, 2022, 12:40 a.m.
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View source: R/parse_datasets.R
| normalize_Athanasiadou | R Documentation |
Utility function that applies the ERCC normalization code from Athanasiadou et al. (2021)
Description
Utility function that applies the ERCC normalization code from Athanasiadou et al. (2021)
Usage
normalize_Athanasiadou(file_dir, SI_file, RNA_file, ERCC_annot, groups)
Arguments
file_dir |
base file directory |
SI_file |
experiment SI file |
RNA_file |
experiment RNA file |
ERCC_annot |
experiment ERCC file |
groups |
per-sample group labels |
Value
matrix of rescaled count data
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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