scaled_counts_ALDEx2: Scale counts using ALDEx2-like size factors

View source: R/fit_pred_models.R

scaled_counts_ALDEx2R Documentation

Scale counts using ALDEx2-like size factors

Description

Scale counts using ALDEx2-like size factors

Usage

scaled_counts_ALDEx2(counts, pseudocount = 0.5)

Arguments

counts

count table oriented as samples (rows) x features (columns)

pseudocount

small count to augment whole matrix by in order to eliminate zero counts

Value

scaled count table oriented as samples (rows) x features (columns)


kimberlyroche/codaDE documentation built on May 11, 2022, 12:40 a.m.