preProcess_polII_expression: Pre-process polII expression data
In lakhanp1/chipmine: Analyze ChIP-seq Data
Description
Usage
Arguments
Value
Examples
View source: R/p03_data_preprocess_functions.R
Description
Pre-process polII expression data
Usage
1
preProcess_polII_expression(expMat, sampleId, expFraction, polIIExpFile)
Arguments
expMat
Path to the polII expression file generated by Miao's script
sampleId
Sample id to be used
expFraction
Fraction of the genes to be considered as expressed
(normally 10% genes are under active transcription in the cell)
polIIExpFile
Complete path for processed output file
Value
complete output file path
Examples
1
lakhanp1/chipmine documentation built on March 6, 2021, 9:06 a.m.
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Description Usage Arguments Value Examples
View source: R/p03_data_preprocess_functions.R
Description
Pre-process polII expression data
Usage
1 | preProcess_polII_expression(expMat, sampleId, expFraction, polIIExpFile)
|
Arguments
expMat |
Path to the polII expression file generated by Miao's script |
sampleId |
Sample id to be used |
expFraction |
Fraction of the genes to be considered as expressed (normally 10% genes are under active transcription in the cell) |
polIIExpFile |
Complete path for processed output file |
Value
complete output file path
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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