dimsum__process_merged_variants: dimsum__process_merged_variants
In lehner-lab/DiMSum: A pipeline for processing deep mutational scanning data
View source: R/dimsum__process_merged_variants.R
dimsum__process_merged_variants R Documentation
dimsum__process_merged_variants
Description
Process nucleotide variants to remove indels, internal constant region variants, not permitted sequences and variants with too many substitutions.
Usage
dimsum__process_merged_variants(dimsum_meta, input_dt)
Arguments
dimsum_meta
an experiment metadata object (required)
input_dt
output path for plots and saved objects (required)
Value
A list of data.tables containing indel variants, rejected variants (internal constant region variants, not permitted sequences and variants with too many substititions) and retained variants
lehner-lab/DiMSum documentation built on April 10, 2024, 4:15 a.m.
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View source: R/dimsum__process_merged_variants.R
| dimsum__process_merged_variants | R Documentation |
dimsum__process_merged_variants
Description
Process nucleotide variants to remove indels, internal constant region variants, not permitted sequences and variants with too many substitutions.
Usage
dimsum__process_merged_variants(dimsum_meta, input_dt)
Arguments
dimsum_meta |
an experiment metadata object (required) |
input_dt |
output path for plots and saved objects (required) |
Value
A list of data.tables containing indel variants, rejected variants (internal constant region variants, not permitted sequences and variants with too many substititions) and retained variants
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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