dimsum__sample_count_distributions: dimsum__sample_count_distributions

In lehner-lab/DiMSum: A pipeline for processing deep mutational scanning data

dimsum__sample_count_distributions

Description

Plot sample nucleotide count distributions split by hamming distance (Nham_nt)

Usage

dimsum__sample_count_distributions(
  input_dt,
  output_file_prefix,
  width = 12,
  height = 8,
  title = "",
  error_rate = 0.001,
  seq_length
)

Arguments

input_dt	input data table with count, WT and remaning column used for facetting (required)
output_file_prefix	plot output path prefix (required)
width	plot width (default: 12)
height	plot height (default: 8)
title	plot title (default: "")
error_rate	sequencing error rate (default: 1e-3)
seq_length	sequence length

Value

Nothing

lehner-lab/DiMSum documentation built on April 5, 2025, 10:06 p.m.