API for liuqivandy/scRNABatchQC
a package for quality control of multiple single cell RNAseq data
| Global functions | |
|---|---|
| .detach_package | Source code |
| .getBiologicalSimilarity | Source code |
| .getCbindRowData | Source code |
| .getDiffGenes | Source code |
| .getGeneData | Source code |
| .getIndividualPathway | Source code |
| .getMeanVarTrend | Source code |
| .getMultiplePathways | Source code |
| .getRange | Source code |
| .getRawColData | Source code |
| .getVarExplainedbyFeature | Source code |
| .getWebGestaltPathway | Source code |
| .isOrganismValid | Source code |
| .is_10X_v2 | Source code |
| .is_10X_v3 | Source code |
| .mergeSparseMatrix | Source code |
| .prepareTableSummary | Source code |
| .tosparse | Source code |
| Bio_OnescRNAseq | Man page Source code |
| Combine_scRNAseq | Man page Source code |
| Process_OnescRNAseq | Man page Source code |
| Process_scRNAseq | Man page Source code |
| Tech_OnescRNAseq | Man page Source code |
| fread_bychunk | Source code |
| generateReport | Man page Source code |
| panel.cor | Source code |
| panel.dot | Source code |
| plotAllPCA | Man page Source code |
| plotAlltSNE | Man page Source code |
| plotAveCountVSdetectRate | Man page Source code |
| plotDensity | Man page Source code |
| plotDiffPathways | Man page Source code |
| plotDiffgenes | Man page Source code |
| plotGeneCountDistribution | Man page Source code |
| plotHVGs | Man page Source code |
| plotHVGsPathways | Man page Source code |
| plotPCPathways | Man page Source code |
| plotPCgenes | Man page Source code |
| plotSampleSimilarity | Man page Source code |
| plotVarianceExplained | Man page Source code |
| plotVarianceTrend | Man page Source code |
| read_10X_v2 | Source code |
| read_10X_v3 | Source code |
| scRNABatchQC | Man page Source code |
