Files in lutsik/MeDeCom
Decomposition of heterogeneous methylomes
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
NEWS
R/LMC_interpretation.R
R/MeDeCom-package.R
R/MeDeComSet-class.R
R/RcppExports.R
R/allGlobals.R
R/contribution_interpretation.R
R/factorizations.R
R/frontend.R
R/gapStatisitics.R
R/markerSelection.R
R/matching.R
R/plotting.R
R/reference.R
R/simulation.R
R/utilities.R
README
README.md
data/datalist
data/example.MeDeComSet.RData
data/example.cg.annotation.RData
data/example.dataset.RData
data/small.example.RnBSet.RData
exec/cluster.script.sge.R
inst/unitTests/test_general.R
man/AVAIL.REFS.Rd
man/MeDeCom-package.Rd
man/MeDeComSet-class.Rd
man/as.MeDeComSet.Rd
man/cluster.refbased.Rd
man/example.MeDeComSet.Rd
man/example.cg.annotation.Rd
man/example.dataset.Rd
man/factorize.alternate.Rd
man/factorize.regr.Rd
man/getLMCs-methods.Rd
man/getProportions-methods.Rd
man/getStatistics-methods.Rd
man/greedymatch.Rd
man/lmc.go.enrichment.Rd
man/lmc.go.plots.tables.Rd
man/lmc.lola.enrichment.Rd
man/lmc.lola.plots.tables.Rd
man/load.lola.for.medecom.Rd
man/locus_plot.Rd
man/matchLMCs.Rd
man/plotLMC.reference.Rd
man/plotLMCs.Rd
man/plotParameters.Rd
man/plotProportions.Rd
man/run.refbased.Rd
man/run.trait.association.Rd
man/run.trait.association.single.Rd
man/runMeDeCom.Rd
src/HCLasso.cpp
src/Makevars
src/Makevars.win
src/QuadHC.cpp
src/RProjSplxBox.cpp
src/RQuadSimplex.cpp
src/RQuadSimplexBox.cpp
src/RcppExports.cpp
src/cppTAfact.cpp
src/dynblas.h
tests/runTests.R
vignettes/MeDeCom.Rmd
vignettes/MeDeCom.html
vignettes/MeDeCom.md
vignettes/MeDeCom_files/MathJax.js
vignettes/figure/unnamed-chunk-10-1.png
vignettes/figure/unnamed-chunk-11-1.png
vignettes/figure/unnamed-chunk-12-1.png
vignettes/figure/unnamed-chunk-13-1.png
vignettes/figure/unnamed-chunk-14-1.png
vignettes/figure/unnamed-chunk-17-1.png
vignettes/figure/unnamed-chunk-18-1.png
vignettes/figure/unnamed-chunk-19-1.png
vignettes/figure/unnamed-chunk-20-1.png
vignettes/figure/unnamed-chunk-22-1.png
vignettes/figure/unnamed-chunk-7-1.png
vignettes/figure/unnamed-chunk-8-1.png
