example.dataset: Example dataset

In lutsik/MeDeCom: Decomposition of heterogeneous methylomes

Example dataset

Description

Contains a data set of methylation values as a matrix with 10,000 rows (CpGs) and 100 columns (samples), a reference of contributions of 5 cell types in the samples, and the reference methylomes of the samples as a matrix with 10,000 rows and 5 columns.

• D, a matrix with 10,000 rows (CpGs) and 100 columns (samples) representing a potential input methylation matrix

• Aref, a reference of contributions of 5 cell types in the samples

• Tref, reference methylomes of the samples as a matrix with 10,000 rows and 5 columns

Usage

data(example.dataset)

Author(s)

Michael Scherer

lutsik/MeDeCom documentation built on Feb. 15, 2023, 11:32 a.m.