lmc.annotation.plots.tables: lmc.annotation.plots.tables

In lutsik/MeDeCom: Decomposition of heterogeneous methylomes

lmc.annotation.plots.tables

Description

This functions calls lmc.annotation.enrichment and returns plots representing those results, as well as the tables with annotation enrichment results.

Usage

lmc.annotation.plots.tables(medecom.result, anno.data, ...)

Arguments

medecom.result	An object of type MeDeComSet-class or the location of an .RData file, where such an object is stored.
anno.data	The original RnBSet-class object containing methylation, sample meta and annotation information, a path to a directory stored by save.rnb.set or a data.frame containing CpG annotations (ann_C)
...	Further arguments passed to lmc.annotation.enrichment

Value

A list with two elements, one of them containing the plots for each LMC and the other for the corresponding annotation enrichment tables

Author(s)

Michael Scherer

See Also

lmc.annotation.enrichment

lutsik/MeDeCom documentation built on July 15, 2024, 4:51 a.m.