matchLMCs: match.components
In lutsik/MeDeCom: Decomposition of heterogeneous methylomes
matchLMCs R Documentation
match.components
Description
Matching the recovered components to the reference
Usage
matchLMCs(That, Tref, method = "corrmatch", check = TRUE,
Ahat = NULL)
Arguments
That
recovered components from factorization
Tref
reference components
method
one of "corrmatch" and "greedymatch"
check
for method "corrmatch": a flag specifying whether to check uniquenes of the match
Ahat
for method "greedymatch": recovered mixing proportions
Details
Wrapper function for component matching methods
Value
a vector of indices. The length and the order of the vector corresponds to the columns of TT
and the indices specify the columns of Tref
lutsik/MeDeCom documentation built on Feb. 15, 2023, 11:32 a.m.
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| matchLMCs | R Documentation |
match.components
Description
Matching the recovered components to the reference
Usage
matchLMCs(That, Tref, method = "corrmatch", check = TRUE, Ahat = NULL)
Arguments
That |
recovered components from factorization |
Tref |
reference components |
method |
one of "corrmatch" and "greedymatch" |
check |
for method "corrmatch": a flag specifying whether to check uniquenes of the match |
Ahat |
for method "greedymatch": recovered mixing proportions |
Details
Wrapper function for component matching methods
Value
a vector of indices. The length and the order of the vector corresponds to the columns of TT
and the indices specify the columns of Tref
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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