Man pages for mgerault/mineCETSAapp
A shiny app for IMPRINTS.CETSA package
| chemarrest | Chemarrest fold-change dataset |
| chemarrest_ave | Chemarrest average fold-change dataset |
| compare_enrich | compare_enrich |
| com_protein_loop | com_protein_loop |
| elu_example1_raw_joined | Raw Protein.Group from the shortened elutriation dataset |
| elu_example2_raw_cleaned | Filtered Protein.Group from the shortened elutriation dataset |
| elu_example3_isoform_resolved | Isorform resolved Protein.Group from the shortened... |
| elu_example4_pre_norm | Rearranged protein abundance from the shortened elutriation... |
| elu_example5_post_norm | Normalized protein abundance from the shortened elutriation... |
| elu_example6_caldiff | Log2 fold change from the shortened elutriation dataset |
| elutriation | Elutriation fold-change dataset |
| elutriation_ave | Elutriation average fold-change dataset |
| find_in_pubmed | find_in_pubmed |
| gene_concept_net | gene_concept_net |
| get_GO_app | get_GO_app |
| get_net_app | get_net_app |
| get_treat_level | get_treat_level |
| hit_for_cell | hit_for_cell |
| hitlist | hitlist |
| hitlist_chemarrest | Hitlist from the chemarrest dataset |
| hitlist_elutriation | Hitlist from the elutriation dataset |
| hit_plotcell | hit_plotcell |
| imprints_barplotting_app | imprints_barplotting_app |
| imprints_barplotting_categorize_peptides | imprints_barplotting_categorize_peptides |
| imprints_barplotting_peptides | imprints_barplotting_peptides |
| imprints_barplotting_simprof | imprints_barplotting_simprof |
| imprints_categorize_peptides | imprints_categorize_peptides |
| IMPRINTS.CETSA.app | IMPRINTS.CETSA.app Package |
| imprints_cleaved_peptides | imprints_cleaved_peptides |
| imprints_heatmap | imprints_heatmap |
| imprints_IS | imprints_IS |
| imprints_isoform_peptides | imprints_isoform_peptides |
| imprints_join_peptides | imprints_join_peptides |
| imprints_network | imprints_network |
| imprints_normalize_peptides | imprints_normalize_peptides |
| imprints_plotting_isoform_peptides | imprints_plotting_isoform_peptides |
| imprints_read_peptides | imprints_read_peptides |
| imprints_remove_peptides | imprints_remove_peptides |
| imprints_sequence_peptides | imprints_sequence_peptides |
| is_in_zone | is_in_zone |
| join_cetsa | join_cetsa |
| join_drugdata | join_drugdata |
| load_data | load_data |
| NN_chemarrest | The non hits from the chemarrest dataset |
| NN_elutriation | The non hits from the elutriation dataset |
| point_in_orga | point_in_orga |
| pr_atlas | Human protein cellular localization from Protein Atlas... |
| pr_atlas_mouse | Mouse protein cellular localization from Protein Atlas... |
| rem_data | rem_data |
| runCETSAapp | Run the app to use IMPRINTS.CETSA.app package |
| run_gsea | run_gsea |
| save_data | save_data |
