elutriation_ave: Elutriation average fold-change dataset

In mgerault/mineCETSAapp: A shiny app for IMPRINTS.CETSA package

Elutriation average fold-change dataset

Description

An IMPRINTS-CETSA dataset containing the mean log2 fold-change between different cell cycle phase.

Usage

elutriation_ave

Format

## 'elutriation_ave' A data frame with 2731 rows and 23 columns:

id

Uniprot protein ID

description

Protein description

37C_G1

Log2 fold-change G1 vs G1 phase at 37°C

37C_G2

Log2 fold-change G2 vs G1 phase at 37°C

37C_S

Log2 fold-change S vs G1 phase at 37°C

47C_G1

Log2 fold-change G1 vs G1 phase at 47°C

47C_G2

Log2 fold-change G2 vs G1 phase at 47°C

47C_S

Log2 fold-change S vs G1 phase at 47°C

50C_G1

Log2 fold-change G1 vs G1 phase at 50°C

50C_G2

Log2 fold-change G2 vs G1 phase at 50°C

50C_S

Log2 fold-change S vs G1 phase at 50°C

52C_G1

Log2 fold-change G1 vs G1 phase at 52°C

52C_G2

Log2 fold-change G2 vs G1 phase at 52°C

52C_S

Log2 fold-change S vs G1 phase at 52°C

54C_G1

Log2 fold-change G1 vs G1 phase at 54°C

54C_G2

Log2 fold-change G2 vs G1 phase at 54°C

54C_S

Log2 fold-change S vs G1 phase at 54°C

57C_G1

Log2 fold-change G1 vs G1 phase at 57°C

57C_G2

Log2 fold-change G2 vs G1 phase at 57°C

57C_S

Log2 fold-change S vs G1 phase at 57°C

sumUniPeps

Median of the number of unique peptides from all temperatures

sumPSMs

Median of the PSMs from all temperatures

countNum

Median of the abundance count from all reference channel

Source

This data were obtained from 7. Dai, L., T. Zhao, X. Bisteau et al. (2018) Modulation of Protein-Interaction States through the Cell Cycle. Cell, 173, 1481-1494.e13.

mgerault/mineCETSAapp documentation built on April 17, 2025, 7:24 p.m.