get_hitchip_taxonomy: HITChip Taxonomy Table
In microbiome/HITChipDB: HITChipDB
Description
Usage
Arguments
Value
Author(s)
References
Examples
View source: R/get_hitchip_taxonomy.R
Description
Get taxonomy table for phylogenetic microarrays (mainly HITChip).
Usage
1
get_hitchip_taxonomy(chip, phylogeny.version = "full", data.dir = NULL)
Arguments
chip
chip type (e.g. 'HITChip')
phylogeny.version
'full' or 'filtered'
(latter is the basis for species/L1/L2 summarization)
data.dir
Data directory path
Value
phylogeny mapping table
Author(s)
Contact: Leo Lahti microbiome-admin@googlegroups.com
References
See citation('microbiome')
Examples
1
# tax.table <- get_hitchip_taxonomy('HITChip', 'full')
microbiome/HITChipDB documentation built on June 7, 2020, 8:25 a.m.
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Description Usage Arguments Value Author(s) References Examples
View source: R/get_hitchip_taxonomy.R
Description
Get taxonomy table for phylogenetic microarrays (mainly HITChip).
Usage
1 | get_hitchip_taxonomy(chip, phylogeny.version = "full", data.dir = NULL)
|
Arguments
chip |
chip type (e.g. 'HITChip') |
phylogeny.version |
'full' or 'filtered' (latter is the basis for species/L1/L2 summarization) |
data.dir |
Data directory path |
Value
phylogeny mapping table
Author(s)
Contact: Leo Lahti microbiome-admin@googlegroups.com
References
See citation('microbiome')
Examples
1 | # tax.table <- get_hitchip_taxonomy('HITChip', 'full')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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