prune16S: Description: filter 16S data

Description Usage Arguments Author(s) References

Description

Arguments:

Usage

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prune16S(
  full16S,
  pmTm.margin = 2.5,
  complement = 1,
  mismatch = 0,
  rmoligos = NULL,
  remove.nonspecific.oligos = FALSE
)

Arguments

full16S

full16S

pmTm.margin

pmTm margin

complement

logical

mismatch

logical

rmoligos

oligos to exclude

remove.nonspecific.oligos

Logical. Remove oligos with multiple targets.

Returns: @return filtered 16S data

Author(s)

Contact: Leo Lahti microbiome-admin@googlegroups.com

References

See citation("microbiome")


microbiome/HITChipDB documentation built on June 7, 2020, 8:25 a.m.