htree.plot: htree.plot

Description Usage Arguments Value Author(s) References

View source: R/htree.plot.R

Description

Plot hierarchical clustering for the input data in absolute and log10 scale using euclidean and pearson correlation similarities. Intended for internal use in the run.profiling.script function.

Usage

1
htree.plot(dat, method = "complete", metric = "pearson")

Arguments

dat

oligoprofile data in original (non-log) domain

method

hierarchical clustering method

metric

clustering similarity measure

Value

Used for its side effects; returns the arguments

Author(s)

Contact: Leo Lahti microbiome-admin@googlegroups.com

References

See citation('microbiome')


microbiome/HITChipDB documentation built on June 7, 2020, 8:25 a.m.