ftRatiostab: Generate a table of feature ratios

In microresearcher/MicroVis: Microbiome Analysis and Visualization

Generate a table of feature ratios

Description

Generate a table of feature ratios

Usage

ftRatiostab(
  melted_data,
  feature1list,
  feature2list,
  factor = NA,
  aggregateBefore = F
)

Arguments

melted_data	Melted metadata and abundance table
feature1list	List of numerator features
feature2list	List of denominator features
factor	(Optional) Factor along which to group samples to calculate an aggregated ratio
aggregateBefore	Aggregate samples before calculating ratios? Stats will not be calculated between groups in this case.

Value

Table of feature ratios between specified features

microresearcher/MicroVis documentation built on Feb. 8, 2024, 10:59 a.m.