inst/extdata/README.md

In mrc-ide/gonovax: Deterministic Compartmental Model of Gonorrhoea with Vaccination

Files included

• inst/extdata/gono_params.csv - posterior parameters previously derived in: Whittles et al (2020) doi:10.1093/cid/ciz1241

• inst/extdata/gono_params_t.csv - new posterior parameters

• inst/extdata/novax_equilib.rds - equilibrium compartment values corresponding to gono_params derived by running: scripts/generate_novax_equilib.R

• inst/extdata/novax_baseline.rds baseline incid and cum_incid from 1 - 20 years after equilibrium derived by running: scripts/generate_novax_baseline.R

• inst/extdata/observed_data.csv - This data is crown copyright used under conditions of the open government licence, derived from Public Health England, National STI surveillance data tables 2019 - Table 4. , and GRASP reports 2009-2019

mrc-ide/gonovax documentation built on Dec. 15, 2024, 11:02 a.m.