barcode_plot: barcode_plot
In mvhunter1/mvhfunctions:
barcode_plot R Documentation
barcode_plot
Description
Create GSEA barcode plot from a chosen pathway.
Usage
barcode_plot(pathway, gsea_pathways, gsea_vector, gsea_results)
Arguments
pathway
the chosen pathway to plot.
gsea_pathways
your list of pathways used for GSEA.
gsea_vector
the ranked vector you used for GSEA with your human gene names and logFC.
gsea_results
your GSEA results dataframe.
Value
A nice looking barcode plot for your chosen pathway with gene ranks.
mvhunter1/mvhfunctions documentation built on May 31, 2024, 3:36 p.m.
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| barcode_plot | R Documentation |
barcode_plot
Description
Create GSEA barcode plot from a chosen pathway.
Usage
barcode_plot(pathway, gsea_pathways, gsea_vector, gsea_results)
Arguments
pathway |
the chosen pathway to plot. |
gsea_pathways |
your list of pathways used for GSEA. |
gsea_vector |
the ranked vector you used for GSEA with your human gene names and logFC. |
gsea_results |
your GSEA results dataframe. |
Value
A nice looking barcode plot for your chosen pathway with gene ranks.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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