nice_bayesspace_feature_plot: nice_bayesspace_feature_plot

In mvhunter1/mvhfunctions:

nice_bayesspace_feature_plot

Description

Plot enhanced expression of a given gene resulting from BayesSpace analysis.

Usage

nice_bayesspace_feature_plot(
  enhanced_obj,
  normal_obj = NULL,
  features,
  cols = brewer.rdpu(n = 100),
  show_comparison = F,
  show_title = F,
  plot_enhanced = T,
  n_col = NULL
)

Arguments

enhanced_obj	Name of enhanced BayesSpace object.
normal_obj	Optional: name of Seurat object to show comparison.
features	Genes to plot expression of.
cols	Colormap for plotting.
show_comparison	if T, will plot both "normal" expression in Seurat object as well as enhanced expression.
show_title	show titles on plots?
plot_enhanced	if F, will only plot the Seurat expression.
n_col	number of columns for final plot.

Value

plots.

mvhunter1/mvhfunctions documentation built on May 31, 2024, 3:36 p.m.