run_gsea_gobp: run_gsea_gobp
In mvhunter1/mvhfunctions:
View source: R/run_gsea_gobp.R
run_gsea_gobp R Documentation
run_gsea_gobp
Description
Run fGSEA on GO biological processes pathway set.
Usage
run_gsea_gobp(marker_list, filter_pval = T)
Arguments
marker_list
FindMarkers output, not converted to human.
filter_pval
if T, filters FindMarkers results to remove p > 0.05.
Value
fGSEA results as dataframe.
mvhunter1/mvhfunctions documentation built on May 31, 2024, 3:36 p.m.
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View source: R/run_gsea_gobp.R
| run_gsea_gobp | R Documentation |
run_gsea_gobp
Description
Run fGSEA on GO biological processes pathway set.
Usage
run_gsea_gobp(marker_list, filter_pval = T)
Arguments
marker_list |
FindMarkers output, not converted to human. |
filter_pval |
if T, filters FindMarkers results to remove p > 0.05. |
Value
fGSEA results as dataframe.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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