readTrees: reads trees from a 2 column , tab seperated, file The first...

Description Usage Arguments Value

View source: R/RERfuncs.R

Description

reads trees from a 2 column , tab seperated, file The first columns is the gene name and the second column is the corresponding tree in parenthetic format known as the Newick or New Hampshire format

Usage

1
readTrees(file, max.read = NA)

Arguments

file

The path to the tree file

max.read

this function takes a while for a whole genome so max.read is useful for testing

Value

A trees object of class "treeObj"


nclark-lab/RERconverge documentation built on Dec. 3, 2018, 7:12 p.m.