manifest_validate: Validate manifest via schematic service

In nf-osi/nfportalutils: NF Portal Utilities

Validate manifest via schematic service

Description

See schematic validation. Get validation results from schematic service. Downstream utils can consume these results for custom display/report.

Usage

manifest_validate(
  data_type,
  json_str = NULL,
  file_name = NULL,
  restrict_rules = FALSE,
  schema_url =
    "https://raw.githubusercontent.com/nf-osi/nf-metadata-dictionary/main/NF.jsonld",
  service = "https://schematic.api.sagebionetworks.org/v1/model/validate"
)

Arguments

data_type	Data type of the manifest to generate (aka Component).
json_str	JSON string representing metadata.
file_name	Path to file, has to be .csv. Ignored if json_str is given.
restrict_rules	Use only basic schematic validation instead of extended validation with Great Expectations, default FALSE.
schema_url	Optional, defaults to main NF 'latest' data model.
service	Service endpoint to use. Defaults to the schematic production endpoint.

nf-osi/nfportalutils documentation built on Feb. 26, 2024, 1:05 p.m.