map_sample_io | R Documentation |
Wrapper to map sample inputs and outputs depending on workflow type.
map_sample_io(
workflow = c("nf-rnaseq", "nf-sarek"),
samplesheet,
syn_out,
sample_level = 2
)
workflow |
Workflow. |
samplesheet |
A local file or syn id of samplesheet. |
syn_out |
Syn id of syn output destination with files of interest. |
sample_level |
If caller is organized by sample, use 2 (default), if samples organized by caller, use 3. See details. |
A table with sample
level
output_id
output_name
input_id
.
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