map_sample_output_rnaseq | R Documentation |
See https://nf-co.re/rnaseq. Given location where workflow has deposited the outputs,
map relevant processed files based on extensions and link these files to source samples.
So for results/star_salmon/<sample>/<file>
, the URI to pass in is the star_salmon
folder.
Warning: Reliance on certain file structure and naming convention can make this somewhat brittle!
map_sample_output_rnaseq(syn_out)
syn_out |
Syn id of syn output destination with files of interest. |
See the related map_sample_input_ss
for mapping sample to inputs instead of outputs.
A data.table
with cols output_name
output_id
sample
workflow
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