bpSim: bpSim
In nriddiford/mutationProfiles: Collection of functions to explore SNV data (e.g. Mutect2/Freebayes) parsed by get_tris.pl
Description
Generate simulated SV breakpoints acroos genomic regions (e.g. mappable regions)
Usage
1
2
3
bpSim(nSites = 1000, byChrom = NA, iterations = 10,
intervals = system.file("extdata", "intervals.bed", package =
"svBreaks"))
Arguments
intervals
File containing genomic regions within which to simulate SNVs [Default 'data/intervals.bed]
N
Number of random breakpoints to generate [Default nrow(bp_data)]
nriddiford/mutationProfiles documentation built on Nov. 7, 2021, 12:14 a.m.
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Description
Generate simulated SV breakpoints acroos genomic regions (e.g. mappable regions)
Usage
1 2 3 | bpSim(nSites = 1000, byChrom = NA, iterations = 10,
intervals = system.file("extdata", "intervals.bed", package =
"svBreaks"))
|
Arguments
intervals |
File containing genomic regions within which to simulate SNVs [Default 'data/intervals.bed] |
N |
Number of random breakpoints to generate [Default nrow(bp_data)] |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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